Synthesis of reference standards to enable single cell metabolomic studies of tetramethylrhodamine-labeled ganglioside GM1

Carbohydr Res. 2007 Feb 26;342(3-4):482-9. doi: 10.1016/j.carres.2006.10.002. Epub 2006 Oct 7.

Abstract

Ganglioside GM1 and its seven potential catabolic products: asialo-GM1, GM2, asialo-GM2, GM3, Lac-Cer, Glc-Cer and Cer, were labeled with tetramethylrhodamine (TMR) to permit ultra-sensitive analysis using laser-induced fluorescence (LIF) detection. The preparation involved acylation of the homogenous C(18)lyso-forms of GM1, Lac-Cer, Glc-Cer and Cer with the N-hydroxysuccinimide ester of a beta-alanine-tethered 6-TMR derivative, followed by conversion of these labeled products using galactosidase, sialidase, and sialyltransferase enzymes. The TMR-glycolipid analogs produced are detectable on TLC down to the 1 ng level by the naked eye. All eight compounds could be separated within 4 min in capillary electrophoresis where they could be detected at the zeptomole (ca. 1000 molecule) level using LIF.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Cattle
  • Electrophoresis, Capillary
  • Fluorescent Dyes / chemistry*
  • G(M1) Ganglioside / analogs & derivatives*
  • G(M1) Ganglioside / isolation & purification
  • G(M1) Ganglioside / metabolism*
  • G(M2) Ganglioside / chemistry
  • G(M2) Ganglioside / metabolism
  • G(M3) Ganglioside / isolation & purification
  • Gangliosides / isolation & purification
  • Neuraminidase / metabolism
  • Reference Standards
  • Rhodamines / chemistry*

Substances

  • Fluorescent Dyes
  • G(M3) Ganglioside
  • Gangliosides
  • Rhodamines
  • G(M2) Ganglioside
  • ganglio-N-triaosylceramide
  • G(M1) Ganglioside
  • tetramethylrhodamine
  • asialo GM1 ganglioside
  • Neuraminidase