Infrared temperature-jump study of the folding dynamics of alpha-helices and beta-hairpins

Methods Mol Biol. 2007:350:1-20. doi: 10.1385/1-59745-189-4:1.

Abstract

The laser-induced temperature-jump (T-jump) technique in conjunction with infrared spectroscopy provides a versatile means to study the early events in protein folding. Compared with the commonly used stopped-flow kinetic methods, the T-jump initiation technique offers a faster time resolution. It allows the study of protein folding processes occurring on the nanosecond-to-microsecond time-scales. In addition, infrared spectroscopy is a powerful tool for characterizing backbone conformation and dynamics. In this chapter, we mainly discuss the application of this technique to the study of the helix-coil transition dynamics and the mechanism of beta-hairpin formation.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Chemical Phenomena
  • Chemistry, Physical
  • Kinetics
  • Lasers
  • Peptides / chemistry*
  • Protein Conformation
  • Protein Folding*
  • Spectrophotometry, Infrared
  • Temperature*

Substances

  • Peptides