Ribosomal synthesis of dehydroalanine-containing peptides

J Am Chem Soc. 2006 Jun 7;128(22):7150-1. doi: 10.1021/ja060966w.

Abstract

Dehydroalanine is a nonproteinogenic amino acid, but it is a component of a wide variety of natural products with therapeutic activities. Indeed, this alpha,beta-unsaturated residue is a highly versatile building block due to its rigidifying effect on peptide backbones and its electrophilicity which allows site-specific thiol ligations of peptides with small molecules or proteins. To harness such versatility in genetically encoded, combinatorial peptide libraries, we report a simple and robust method for the ribosomal synthesis of dehydroalanine-containing peptides. Selenalysine, a selenium-containing lysine analogue, was recruited as a masked dehydroalanine equivalent. This residue is efficiently incorporated by a reconstituted Escherichia coli translation system at high fidelity and efficiency despite the presence of low levels of lysine. Mild oxidative conditions were used to convert selenalysine into dehydroalanine post-translationally. Using this method, we demonstrate the preparation of polyunsaturated and highly decorated peptides. This report is an important step toward the preparation and selection of large libraries of protein-reactive compounds with potential use as novel drugs or as analytical tools.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alanine / analogs & derivatives*
  • Alanine / chemistry
  • Escherichia coli / genetics
  • Lysine / analogs & derivatives
  • Lysine / chemistry
  • Organoselenium Compounds / chemistry
  • Peptides, Cyclic / chemical synthesis*
  • Peptides, Cyclic / chemistry
  • Protein Biosynthesis*
  • Protein Conformation
  • RNA, Messenger / genetics
  • Ribosomes / chemistry
  • Ribosomes / metabolism*

Substances

  • Organoselenium Compounds
  • Peptides, Cyclic
  • RNA, Messenger
  • selenalysine
  • dehydroalanine
  • Lysine
  • Alanine