NMR-driven secondary and tertiary structure model of Ca2+-loaded calexcitin

Biochem Biophys Res Commun. 2006 May 5;343(2):520-4. doi: 10.1016/j.bbrc.2006.02.182. Epub 2006 Mar 10.

Abstract

Calexcitin (CE) is a Ca2+-binding protein which is expressed in neuronal cells and is a member of the sarcoplasmic Ca2+-binding protein subfamily. The peptide backbone of Ca2+-CE has been assigned by NMR and it shows that CE is composed of nine alpha-helices-forming four EF-hands and an additional helix near the C-terminus. A structural model of CE suggests the presence of a putative recessed hydrophobic pocket that may be involved in Ca2+-mediated protein-ligand interactions. This feature is unique to CE and is absent in other SCPs, such as those from Branchiostoma and Nereis, and from calerythrin.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Binding Sites
  • Caenorhabditis elegans Proteins / analysis
  • Caenorhabditis elegans Proteins / chemistry*
  • Calcium / analysis
  • Calcium / chemistry*
  • Calcium-Binding Proteins / analysis
  • Calcium-Binding Proteins / chemistry*
  • Computer Simulation
  • GTP-Binding Proteins / analysis
  • GTP-Binding Proteins / chemistry*
  • Magnetic Resonance Spectroscopy / methods*
  • Models, Chemical*
  • Models, Molecular*
  • Protein Binding
  • Protein Structure, Secondary
  • Protein Structure, Tertiary

Substances

  • Caenorhabditis elegans Proteins
  • Calcium-Binding Proteins
  • GTP-Binding Proteins
  • cex-2 protein, C elegans
  • Calcium