A nucleolin-binding 3' untranslated region element stabilizes beta-globin mRNA in vivo

Mol Cell Biol. 2006 Mar;26(6):2419-29. doi: 10.1128/MCB.26.6.2419-2429.2006.

Abstract

The normal expression of human beta globin is critically dependent upon the constitutively high stability of its encoding mRNA. Unlike with alpha-globin mRNA, the specific cis-acting determinants and trans-acting factors that participate in stabilizing beta-globin mRNA are poorly described. The current work uses a linker-scanning strategy to identify a previously unknown determinant of mRNA stability within the beta-globin 3' untranslated region (3'UTR). The new determinant is positioned on an mRNA half-stem opposite a pyrimidine-rich sequence targeted by alphaCP/hnRNP-E, a factor that plays a critical role in stabilizing human alpha-globin mRNA. Mutations within the new determinant destabilize beta-globin mRNA in intact cells while also ablating its 3'UTR-specific interaction with the polyfunctional RNA-binding factor nucleolin. We speculate that 3'UTR-bound nucleolin enhances mRNA stability by optimizing alphaCP access to its functional binding site. This model is favored by in vitro evidence that alphaCP binding is enhanced both by cis-acting stem-destabilizing mutations and by the trans-acting effects of supplemental nucleolin. These studies suggest a mechanism for beta-globin mRNA stability that is related to, but distinct from, the mechanism that stabilizes human alpha-globin mRNA.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • 3' Untranslated Regions*
  • Base Sequence
  • Binding Sites
  • Cells, Cultured
  • Cytoplasm / metabolism
  • Erythrocytes / metabolism
  • Erythroid Precursor Cells / metabolism
  • Globins / genetics*
  • Globins / metabolism
  • HeLa Cells
  • Humans
  • Molecular Sequence Data
  • Mutation
  • Nucleolin
  • Phosphoproteins / genetics
  • Phosphoproteins / metabolism*
  • RNA Stability*
  • RNA, Messenger / metabolism
  • RNA-Binding Proteins / genetics
  • RNA-Binding Proteins / metabolism*
  • Reproducibility of Results

Substances

  • 3' Untranslated Regions
  • Phosphoproteins
  • RNA, Messenger
  • RNA-Binding Proteins
  • Globins