Oligonucleotide ligation assay for detection of mutations associated with reverse transcriptase and protease inhibitor resistance in non-B subtypes and recombinant forms of human immunodeficiency virus type 1

J Clin Microbiol. 2005 Oct;43(10):5301-4. doi: 10.1128/JCM.43.10.5301-5304.2005.

Abstract

The oligonucleotide ligation assay is a genotypic assay for the detection of resistance-associated mutations to reverse transcriptase and protease inhibitors in human immunodeficiency virus type 1 subtype B. This assay has been modified and developed for non-B subtypes and recombinant strains and has been evaluated with sequencing, resulting in a more sensitive assay than sequencing for non-B subtypes.

Publication types

  • Evaluation Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Anti-HIV Agents / pharmacology*
  • DNA Ligases / metabolism*
  • Drug Resistance, Viral / genetics*
  • Gene Products, pol / genetics
  • HIV Infections / virology
  • HIV Protease Inhibitors / pharmacology*
  • HIV-1 / classification
  • HIV-1 / drug effects*
  • HIV-1 / genetics
  • Humans
  • Microbial Sensitivity Tests / methods
  • Oligonucleotides / chemistry
  • Oligonucleotides / genetics
  • Oligonucleotides / metabolism*
  • Point Mutation*
  • RNA, Viral / blood
  • Recombination, Genetic
  • Reverse Transcriptase Inhibitors / pharmacology*
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sensitivity and Specificity
  • Time Factors

Substances

  • Anti-HIV Agents
  • Gene Products, pol
  • HIV Protease Inhibitors
  • Oligonucleotides
  • RNA, Viral
  • Reverse Transcriptase Inhibitors
  • DNA Ligases