A Java application for tissue section image analysis

Comput Methods Programs Biomed. 2005 Feb;77(2):99-113. doi: 10.1016/j.cmpb.2004.04.003.

Abstract

The medical industry has taken advantage of Java and Java technologies over the past few years, in large part due to the language's platform-independence and object-oriented structure. As such, Java provides powerful and effective tools for developing tissue section analysis software. The background and execution of this development are discussed in this publication. Object-oriented structure allows for the creation of "Slide", "Unit", and "Cell" objects to simulate the corresponding real-world objects. Different functions may then be created to perform various tasks on these objects, thus facilitating the development of the software package as a whole. At the current time, substantial parts of the initially planned functionality have been implemented. Getafics 1.0 is fully operational and currently supports a variety of research projects; however, there are certain features of the software that currently introduce unnecessary complexity and inefficiency. In the future, we hope to include features that obviate these problems.

MeSH terms

  • Cytological Techniques / instrumentation*
  • Humans
  • Image Processing, Computer-Assisted*
  • Models, Biological*
  • Programming Languages*
  • User-Computer Interface