Detection of hepatitis B virus DNA by real-time PCR using TaqMan-MGB probe technology

World J Gastroenterol. 2005 Jan 28;11(4):508-10. doi: 10.3748/wjg.v11.i4.508.

Abstract

Aim: To develop a real-time PCR for detecting hepatitis B virus (HBV) DNA based on TaqMan technology using a new MGB probe.

Methods: Plasmid containing the sequence of X gene (1414-1744 nt) was constructed as HBV-DNA standard for quantitative analysis. A TaqMan-MGB probe between primers for amplification was designed to detect PCR products. The interested sequence contained in the plasmid and in clinical specimens was quantitatively measured.

Results: The detection limit of the assay for HBV DNA was 1 genome equivalent per reaction. A linear standard curve was obtained between 10(0) and 10(9) DNA copies/reaction (r>0.990). None of the negative control samples showed false-positive reactions in duplicate. HBV DNA was detected in 100% (50/50) of HBV patients with HbeAg, and in 72.0% (36/50) with HBsAg, HBeAb and HBcAb. The coefficient of variation for both intra- and inter-experimental variability demonstrated high reproducibility and accuracy.

Conclusion: Real-time PCR based on TaqMan-MGB probe technology is an excellent method for detection of HBV DNA.

MeSH terms

  • Base Sequence
  • DNA Probes / genetics
  • DNA, Viral / analysis
  • Hepatitis B virus / genetics*
  • Hepatitis B virus / isolation & purification*
  • Hepatitis B, Chronic / diagnosis*
  • Humans
  • Molecular Sequence Data
  • Plasmids
  • Polymerase Chain Reaction / methods*
  • Polymerase Chain Reaction / standards
  • Recombinant Proteins / genetics
  • Reproducibility of Results
  • Sensitivity and Specificity
  • Taq Polymerase*

Substances

  • DNA Probes
  • DNA, Viral
  • Recombinant Proteins
  • Taq Polymerase