Saccharothrix xinjiangensis sp. nov., a pyrene-degrading actinomycete isolated from Tianchi Lake, Xinjiang, China

Int J Syst Evol Microbiol. 2004 Nov;54(Pt 6):2091-2094. doi: 10.1099/ijs.0.63143-0.

Abstract

A pyrene-degrading isolate, strain PYX-6(T), was obtained from Tianchi Lake, Xinjiang Uygur Autonomous Region, China, and was identified by means of polyphasic taxonomy. On the basis of 16S rRNA gene sequence similarity, strain PYX-6(T) was closely related to members of the genus Saccharothrix. Its 16S rRNA gene sequence similarity to each of Saccharothrix syringae, Saccharothrix australiensis, Saccharothrix algeriensis and Saccharothrix coeruleofusca was 98 %. Chemotaxonomic and physiological properties of strain PYX-6(T) further supported its affiliation to the genus Saccharothrix. DNA-DNA hybridization results and physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain PYX-6(T) from recognized Saccharothrix species. Therefore, strain PYX-6(T) represents a novel species, for which the name Saccharothrix xinjiangensis sp. nov. is proposed, with type strain PYX-6(T) (=AS 4.1731(T)=JCM 12329(T)).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actinomycetales / chemistry
  • Actinomycetales / classification*
  • Actinomycetales / isolation & purification*
  • Actinomycetales / physiology
  • Bacterial Typing Techniques
  • Biodegradation, Environmental
  • Carbohydrate Metabolism
  • China
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Fatty Acids / analysis
  • Fatty Acids / isolation & purification
  • Fresh Water / microbiology*
  • Genes, rRNA
  • Hypertonic Solutions
  • Molecular Sequence Data
  • Nucleic Acid Hybridization
  • Phylogeny
  • Pyrenes / metabolism*
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Water Microbiology

Substances

  • DNA, Bacterial
  • DNA, Ribosomal
  • Fatty Acids
  • Hypertonic Solutions
  • Pyrenes
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • pyrene

Associated data

  • GENBANK/AY135693