Alternative splicing of Rac1 generates Rac1b, a self-activating GTPase

J Biol Chem. 2004 Feb 6;279(6):4743-9. doi: 10.1074/jbc.M310281200. Epub 2003 Nov 18.

Abstract

Rac1b was recently identified in malignant colorectal tumors as an alternative splice variant of Rac1 containing a 19-amino acid insertion next to the switch II region. The structures of Rac1b in the GDP- and the GppNHp-bound forms, determined at a resolution of 1.75 A, reveal that the insertion induces an open switch I conformation and a highly mobile switch II. As a consequence, Rac1b has an accelerated GEF-independent GDP/GTP exchange and an impaired GTP hydrolysis, which is restored partially by GTPase-activating proteins. Interestingly, Rac1b is able to bind the GTPase-binding domain of PAK but not full-length PAK in a GTP-dependent manner, suggesting that the insertion does not completely abolish effector interaction. The presented study provides insights into the structural and biochemical mechanism of a self-activating GTPase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alternative Splicing
  • Binding Sites
  • Crystallography, X-Ray
  • DNA-Binding Proteins
  • Enzyme Activation
  • Guanosine Triphosphate / metabolism
  • Humans
  • Hydrolysis
  • In Vitro Techniques
  • Kinetics
  • Models, Molecular
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism
  • Transcription Factors / metabolism
  • rac1 GTP-Binding Protein / chemistry
  • rac1 GTP-Binding Protein / genetics*
  • rac1 GTP-Binding Protein / metabolism*

Substances

  • DNA-Binding Proteins
  • Recombinant Proteins
  • SLC2A4RG protein, human
  • Transcription Factors
  • Guanosine Triphosphate
  • rac1 GTP-Binding Protein

Associated data

  • PDB/1RYF
  • PDB/1RYH