Molecular characterization of a ribosome-associated Hsp70-homologous gene from Rhizopus nigricans

Biochim Biophys Acta. 2003 Oct 1;1629(1-3):109-13. doi: 10.1016/j.bbaexp.2003.08.003.

Abstract

A ribosome-associated Hsp70-homologous gene (Rnssb-1) was isolated from the genomic library of the filamentous zygomycete fungus Rhizopus nigricans. The nucleotide sequence of a genomic clone encoded the N-terminal part of a protein with high similarity to the yeast SSB ribosome-associated chaperones. The missing 3' end of the gene was obtained by 3' RACE. The Northern blot analysis showed that the Rnssb-1 gene is constitutively expressed and is not induced upon heat shock at 37 degrees C. The primary structure analyses revealed that the coding region of the Rnssb-1 gene is interrupted by at least four introns. Their splicing was not inhibited by exposure of the organism to heat shock as proven by RT-PCR. A Southern blot analysis of R. nigricans genomic DNA confirmed the presence of two additional gene copies of ribosome-associated Hsp70 genes in the fungal genome.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Sequence
  • Blotting, Northern
  • Blotting, Southern
  • DNA, Complementary
  • HSP70 Heat-Shock Proteins / genetics*
  • Molecular Sequence Data
  • Rhizopus / genetics*
  • Ribosomes
  • Sequence Alignment

Substances

  • DNA, Complementary
  • HSP70 Heat-Shock Proteins

Associated data

  • GENBANK/AY257252
  • GENBANK/AY277623
  • GENBANK/AY277624
  • GENBANK/AY277625