Proteomic analysis of a lymphoma-derived cell line (DG75) following treatment with a demethylating drug: modification of membrane-associated proteins

Proteomics. 2003 Jun;3(6):1028-36. doi: 10.1002/pmic.200300374.

Abstract

5'-azacytidine (AZC) is a potent DNA demethylating agent used clinically for treatment of patients with malignant hemopathies. We have previously shown that AZC induces a halt in cell growth and a decrease of cell activity, without affecting cell viability. We have also shown using proteomics, that 35 polypeptides were differentially expressed in a cytoplasmic fraction. The aim of this study was to provide a more complete picture of modifications in AZC-treated cells using cell membrane preparations. Therefore the protein pattern changes following AZC treatment of the cell line DG75 were studied on a detergent-solubilized fraction obtained from these membranes. Results showed that 49 proteins were differentially expressed in the membrane fraction. Seven polypeptides were down-regulated, while 42 were up-regulated. The identity of most of these differentially expressed proteins was determined by mass spectrometry (liquid chromatography-tandem mass spectrometry or matrix-assisted laser desorption/ionization-time of flight), and the identified proteins were grouped based on cellular function and participation in biochemical and signaling pathways.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Antimetabolites, Antineoplastic / pharmacology
  • Antimetabolites, Antineoplastic / therapeutic use
  • Azacitidine / pharmacology
  • Azacitidine / therapeutic use
  • Cell Line, Tumor
  • Chromatography, Liquid
  • Gels
  • Humans
  • Lymphoma / drug therapy
  • Lymphoma / metabolism*
  • Mass Spectrometry
  • Membrane Proteins / analysis*
  • Membrane Proteins / classification
  • Membrane Proteins / drug effects
  • Membrane Proteins / metabolism
  • Proteome / analysis*
  • Proteome / drug effects
  • Proteome / isolation & purification
  • Proteome / metabolism
  • Proteomics*
  • Proton-Motive Force
  • Signal Transduction
  • Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

Substances

  • Antimetabolites, Antineoplastic
  • Gels
  • Membrane Proteins
  • Proteome
  • Azacitidine