IPPRED: server for proteins interactions inference

Nicolas Goffard; Virginie Garcia; Florian Iragne; Alexis Groppi; Antoine de Daruvar

doi:10.1093/bioinformatics/btg091

IPPRED: server for proteins interactions inference

Bioinformatics. 2003 May 1;19(7):903-4. doi: 10.1093/bioinformatics/btg091.

Authors

Nicolas Goffard¹, Virginie Garcia, Florian Iragne, Alexis Groppi, Antoine de Daruvar

Affiliation

¹ Centre de Bioinformatique Bordeaux, Université V. Segalen Bordeaux 2, 146 rue Léo Saignat, France.

PMID: 12724307
DOI: 10.1093/bioinformatics/btg091

Abstract

Summary: IPPRED is a web based server to infer protein-protein interactions through homology search between candidate proteins and those described as interacting. This simple inference allows to propose or to validate potential interactions.

Availability: IPPRED is freely available at http://cbi.labri.fr/outils/ippred/.

Publication types

Comparative Study
Evaluation Study
Research Support, Non-U.S. Gov't
Validation Study

MeSH terms

Algorithms*
Amino Acid Sequence
Computers
Database Management Systems
Databases, Protein*
Information Storage and Retrieval / methods*
Internet
Local Area Networks
Macromolecular Substances
Molecular Sequence Data
Protein Binding
Proteins / chemistry*
Proteins / classification
Sequence Alignment / methods*
Sequence Analysis / methods*
Sequence Homology, Amino Acid*
User-Computer Interface

Substances

Macromolecular Substances
Proteins