Metal dependency for transcription factor rho activation

Biochemistry. 2003 Feb 18;42(6):1652-9. doi: 10.1021/bi020601y.

Abstract

The Escherichia coli rho transcription termination factor terminates select transcripts and rho activity requires Mg(2+). We investigated whether divalent metal ions other than Mg(2+) catalyze rho-dependent ATP hydrolysis to ADP and P(i) in vitro. The effects of 11 divalent metal ions (Be(2+), Ca(2+), Cd(2+), Co(2+), Cu(2+), Hg(2+), Mn(2+), Ni(2+), Sr(2+), VO(2+), Zn(2+)) on ATPase activity were determined in the absence and presence of MgCl(2). Without MgCl(2), Ca(2+), Cd(2+), Co(2+), Cu(2+), Hg(2+), Mn(2+), Ni(2+), VO(2+), and Zn(2+) activated ATP hydrolysis with either hyberbolic (Ca(2+), Co(2+), Cu(2+), Hg(2+), VO(2+)), peak velocity (Cd(2+), Mn(2+), Zn(2+)), or sigmoidal (Ni(2+)) rate acceleration curves. Sr(2+) was found to be a nonactivator and Be(2+) an inhibitor of rho-dependent ATPase activity. The metals' effects were compared with Mg(2+) and gave different rank orders when either the velocity (V(max), V(peak)) or the efficiency (V(max)/K(M), V(peak)/K(M)) of ATP hydrolysis was used as the determinant (V: Mg(2+) approximately Mn(2+) > Zn(2+) > Co(2+) > Ni(2+) approximately Cd(2+) > Ca(2+) > Cu(2+) > Hg(2+) approximately VO(2+); V/K(M): Mg(2+) > Mn(2+) > Ca(2+) > Co(2+) > Zn(2+) > Cu(2+) > Ni(2+) > Hg(2+) > Cd(2+)). Mg(2+) proved to be the most effective divalent metal. We observed that the metal-dependent rates were affected by metal ion interactions with rho, RNA, and the buffer constituents. Significantly, replacement of the octahedral Mg(2+) ion by metals that typically prefer coordination spheres less than six (Cd(2+), Co(2+), Ni(2+), VO(2+), Zn(2+)) led to ATPase activity, suggesting that the putative Mg x ATP(2-) coordination sphere in rho does not need to remain fully intact for ATP hydrolysis.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adenosine Triphosphate / chemistry
  • Bacterial Proton-Translocating ATPases / antagonists & inhibitors
  • Bridged Bicyclo Compounds, Heterocyclic / chemistry
  • Cadmium / chemistry
  • Calcium / chemistry
  • Cations, Divalent / chemistry
  • Cobalt / chemistry
  • Copper / chemistry
  • Escherichia coli Proteins / chemistry
  • Escherichia coli Proteins / metabolism
  • Hydrolysis
  • Magnesium Chloride / chemistry
  • Manganese / chemistry
  • Metals, Heavy / chemistry*
  • Rho Factor / chemistry
  • Rho Factor / metabolism*
  • Zinc / chemistry

Substances

  • Bridged Bicyclo Compounds, Heterocyclic
  • Cations, Divalent
  • Escherichia coli Proteins
  • Metals, Heavy
  • Rho Factor
  • Cadmium
  • Magnesium Chloride
  • Cobalt
  • Manganese
  • Copper
  • Adenosine Triphosphate
  • Bacterial Proton-Translocating ATPases
  • bicozamycin
  • Zinc
  • Calcium