AP endonuclease 1 has no biologically significant 3(')-->5(')-exonuclease activity

Biochem Biophys Res Commun. 2003 Jan 3;300(1):182-7. doi: 10.1016/s0006-291x(02)02808-5.

Abstract

The 3(')-->5(')-exonucleolytic activity of human apurinic/apyrimidinic endonuclease 1 (APE1) on mispaired DNA at the 3(')-termini of recessed, nicked or gapped DNA molecules was analyzed and compared with the primary endonucleolytic activity. We found that under reaction conditions optimal for AP endonuclease activity the 3(')-->5(')-exonuclease activity of APE1 manifests only at enzyme concentration elevated by 6-7 orders of magnitude. This activity does not show a preference to mismatched compared to matched DNA structures as well as to nicked or gapped DNA substrates in comparison to recessed ones. Therefore, the 3(')-->5(')-exonuclease activity associated with APE1 can hardly be considered as key mechanism that improves fidelity of DNA repair.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Base Pair Mismatch
  • Base Sequence
  • Carbon-Oxygen Lyases / metabolism*
  • DNA / chemistry
  • DNA / genetics
  • DNA / metabolism
  • DNA Repair
  • DNA-(Apurinic or Apyrimidinic Site) Lyase
  • Exodeoxyribonuclease V
  • Exodeoxyribonucleases / metabolism*
  • Humans
  • In Vitro Techniques
  • Recombinant Proteins / metabolism
  • Substrate Specificity

Substances

  • Recombinant Proteins
  • DNA
  • Exodeoxyribonucleases
  • Exodeoxyribonuclease V
  • Carbon-Oxygen Lyases
  • APEX1 protein, human
  • DNA-(Apurinic or Apyrimidinic Site) Lyase