Identification and sequencing of HLA-B*0714 and B*2718 alleles and novel exon 1 sequences of B*0709 and B*2714 alleles in potential bone marrow donors

Tissue Antigens. 2002 May;59(5):426-9. doi: 10.1034/j.1399-0039.2002.590512.x.

Abstract

Sequence specific oligonucleotide probe hybridization and sequence specific primer PCR typing of volunteer bone marrow donors suggested the presence of variants of known HLA-B alleles in two individuals. PCR products encompassing HLA-B locus exons 1, 2, and 3 were prepared, subcloned and sequenced. A Hispanic individual had a novel B*07 allele (B*0714) and a Chinese individual had a novel B*27 allele (B*2718). In two other individuals, a previously unknown sequence of exon 1 was determined for HLA-B*0709 (African American) and B*2714 (Native American). These findings further illustrate the substantial genetic variation present at the HLA-B locus within human populations. We discuss the structural variation in the protein sequence for these HLA-B alleles and its potential functional effects.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Asian People / genetics
  • Black People / genetics
  • Black or African American
  • Bone Marrow Transplantation / immunology*
  • Exons
  • HLA-B Antigens / genetics*
  • Hispanic or Latino / genetics
  • Humans
  • Indians, North American / genetics
  • Tissue Donors

Substances

  • HLA-B Antigens