Abstract
To identify molecular alterations in the progression of colorectal carcinoma, we analyzed gene expression profiles of colon cancer cell lines derived from primary and metastatic tumors from a single patient. Of 2280 cDNAs investigated using our in-house microarray, the expression of 6 genes (tumor-associated antigen L6, L-plastin, the human homologue of yeast ribosomal protein S28, the B-cell translocation gene, mitochondrial aspartate-aminotransferase, and HLA-A) increased, while that of 2 genes (keratin 5 and phosphoglucomutase) decreased in metastatic-tumor-derived cells compared with primary-tumor-derived cells. Of these genes, we assessed the L-plastin gene, an actin-bundling protein, at the protein level using a tissue microarray consisting of 58 clinically stratified colorectal cancer specimens. Consistent with our microarray results, the expression of L-plastin was significantly correlated with the progression of cancer staging. Therefore, our results suggest that the L-plastin gene is a potential metastatic marker. In addition, combining cDNA microarrays and tissue arrays, as shown here, is thought to facilitate the rapid characterization of candidate biomarkers.
(c)2001 Elsevier Science.
MeSH terms
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Antigens, Surface / genetics
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Aspartate Aminotransferase, Mitochondrial / genetics
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Base Sequence
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Biomarkers, Tumor / genetics
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Colorectal Neoplasms / genetics*
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Colorectal Neoplasms / pathology
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Colorectal Neoplasms / secondary*
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DNA, Complementary / genetics
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DNA, Neoplasm / genetics
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Gene Expression Profiling
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HLA-A Antigens / genetics
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Humans
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Keratin-5
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Keratins / genetics
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Membrane Glycoproteins
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Microfilament Proteins
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Neoplasm Proteins / genetics
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Neoplasm Staging
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Oligonucleotide Array Sequence Analysis
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Phosphoglucomutase / genetics
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Phosphoproteins / genetics*
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RNA, Messenger / genetics
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RNA, Messenger / metabolism
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RNA, Neoplasm / genetics
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RNA, Neoplasm / metabolism
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Receptors, Formyl Peptide
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Receptors, Immunologic / genetics
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Receptors, Peptide / genetics
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Reverse Transcriptase Polymerase Chain Reaction
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Tumor Cells, Cultured
Substances
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Antigens, Surface
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Biomarkers, Tumor
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DNA, Complementary
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DNA, Neoplasm
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HLA-A Antigens
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KRT5 protein, human
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Keratin-5
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Membrane Glycoproteins
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Microfilament Proteins
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Neoplasm Proteins
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Phosphoproteins
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RNA, Messenger
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RNA, Neoplasm
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Receptors, Formyl Peptide
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Receptors, Immunologic
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Receptors, Peptide
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plastin
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TM4SF1 protein, human
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Keratins
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Aspartate Aminotransferase, Mitochondrial
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Phosphoglucomutase