Protein folding from a highly disordered denatured state: the folding pathway of chymotrypsin inhibitor 2 at atomic resolution

Proc Natl Acad Sci U S A. 2001 Apr 10;98(8):4349-54. doi: 10.1073/pnas.071054398. Epub 2001 Mar 27.

Abstract

Previous experimental and theoretical studies have produced high-resolution descriptions of the native and folding transition states of chymotrypsin inhibitor 2 (CI2). In similar fashion, here we use a combination of NMR experiments and molecular dynamics simulations to examine the conformations populated by CI2 in the denatured state. The denatured state is highly unfolded, but there is some residual native helical structure along with hydrophobic clustering in the center of the chain. The lack of persistent nonnative structure in the denatured state reduces barriers that must be overcome, leading to fast folding through a nucleation-condensation mechanism. With the characterization of the denatured state, we have now completed our description of the folding/unfolding pathway of CI2 at atomic resolution.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Nuclear Magnetic Resonance, Biomolecular
  • Peptides / chemistry*
  • Plant Proteins
  • Protein Conformation
  • Protein Denaturation
  • Protein Folding

Substances

  • Peptides
  • Plant Proteins
  • chymotrypsin inhibitor 2