Prenatal molecular cytogenetic diagnosis of partial tetrasomy 10p due to neocentromere formation in an inversion duplication analphoid marker chromosome

Cytogenet Cell Genet. 2000;91(1-4):165-70. doi: 10.1159/000056839.

Abstract

Neocentromeres are fully functional centromeres found on rearranged or marker chromosomes that have separated from endogenous centromeres. Neocentromeres often result in partial tri- or tetrasomy because their formation confers mitotic stability to acentric chromosome fragments that would normally be lost. We describe the prenatal identification and characterization of a de novo supernumerary marker chromosome (SMC) containing a neocentromere in a 20-wk fetus by the combined use of comparative genomic hybridization (CGH) and fluorescence in situ hybridization (FISH). GTG-banding of fetal metaphases revealed a 47,XY,+mar karyotype in 100% of cultured amniocytes; parental karyotypes were both normal. Although sequential tricolor FISH using chromosome-specific painting probes identified a chromosome 10 origin of the marker, a complete panel of chromosome-specific centromeric satellite DNA probes failed to hybridize to any portion of the marker. The presence of a neocentromere on the marker chromosome was confirmed by the absence of hybridization of an all-human-centromere alpha-satellite DNA probe, which hybridizes to all normal centromeres, and the presence of centromere protein (CENP)-C, which is associated specifically with active kinetochores. Based on CGH analysis and FISH with a chromosome 10p subtelomeric probe, the marker was found to be an inversion duplication of the distal portion of chromosome 10p. Thus, the proband's karyotype was 47,XY,+inv dup(10)(pter-->p14 approximately 15::p14 approximately 15-->neo-->pter), which is the first report of partial tetrasomy 10p resulting from an analphoid marker chromosome with a neocentromere. This study illustrates the use of several molecular strategies in distinguishing centric alphoid markers from neocentric analphoid markers.

Publication types

  • Case Reports
  • Comparative Study
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Adult
  • Amniocentesis
  • Aneuploidy*
  • Centromere / genetics*
  • Chromosome Aberrations / diagnosis*
  • Chromosome Aberrations / genetics
  • Chromosome Banding
  • Chromosome Disorders
  • Chromosome Inversion*
  • Chromosome Painting
  • Chromosomes, Human, Pair 10 / genetics*
  • DNA Probes / genetics
  • DNA, Satellite / genetics
  • Female
  • Gene Duplication*
  • Genetic Markers / genetics
  • Humans
  • Karyotyping
  • Maternal Age
  • Pregnancy
  • Pregnancy, High-Risk
  • Prenatal Diagnosis*

Substances

  • DNA Probes
  • DNA, Satellite
  • Genetic Markers