Detection and characterization of genetic recombination in cytopathic type 2 bovine viral diarrhea viruses

J Virol. 2000 Sep;74(18):8771-4. doi: 10.1128/jvi.74.18.8771-8774.2000.

Abstract

In cytopathic bovine viral diarrhea virus genotype 1 (BVDV1) isolates, insertions are reported at position A (amino acid [aa] 1535) and position B (aa 1589). Insertions at position B predominate. In this survey it was found that in BVDV2, insertions at position A predominate. Possible reasons for this difference in relative frequency are discussed.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Cattle
  • Cytopathogenic Effect, Viral / genetics*
  • Diarrhea Virus 1, Bovine Viral / genetics*
  • Diarrhea Virus 2, Bovine Viral / genetics*
  • Genome, Viral*
  • Genotype
  • Molecular Sequence Data
  • Mutagenesis, Insertional
  • Peptide Hydrolases / genetics
  • Phylogeny
  • Polymerase Chain Reaction
  • RNA Helicases / genetics
  • Recombination, Genetic*
  • Sequence Alignment
  • Sequence Analysis, Protein
  • Viral Nonstructural Proteins / genetics

Substances

  • Viral Nonstructural Proteins
  • p80 protein, bovine viral diarrhea virus
  • Peptide Hydrolases
  • RNA Helicases

Associated data

  • GENBANK/AF268171
  • GENBANK/AF268180