Structure of a thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus

J Mol Biol. 2000 Jul 14;300(3):587-95. doi: 10.1006/jmbi.2000.3871.

Abstract

The 2.3 A resolution crystal structure of a [2Fe-2S] cluster containing ferredoxin from Aquifex aeolicus reveals a thioredoxin-like fold that is novel among iron-sulfur proteins. The [2Fe-2S] cluster is located near the surface of the protein, at a site corresponding to that of the active-site disulfide bridge in thioredoxin. The four cysteine ligands are located near the ends of two surface loops. Two of these ligands can be substituted by non-native cysteine residues introduced throughout a stretch of the polypeptide chain that forms a protruding loop extending away from the cluster. The presence of homologs of this ferredoxin as components of more complex anaerobic and aerobic electron transfer systems indicates that this is a versatile fold for biological redox processes.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Amino Acid Substitution / genetics
  • Bacteria / chemistry*
  • Bacteria / genetics
  • Binding Sites
  • Crystallography, X-Ray
  • Cysteine / genetics
  • Cysteine / metabolism
  • Dimerization
  • Disulfides / metabolism
  • Electron Transport Complex I
  • Ferredoxins / chemistry*
  • Ferredoxins / genetics
  • Iron / metabolism
  • Ligands
  • Models, Molecular
  • Molecular Sequence Data
  • Molybdoferredoxin / metabolism
  • NADH, NADPH Oxidoreductases / chemistry
  • Nitrogenase / metabolism
  • Protein Binding
  • Protein Folding
  • Protein Structure, Secondary
  • Sequence Alignment
  • Sulfur / metabolism
  • Thioredoxins / chemistry*

Substances

  • Disulfides
  • Ferredoxins
  • Ligands
  • Molybdoferredoxin
  • Thioredoxins
  • Sulfur
  • Iron
  • Nitrogenase
  • NADH, NADPH Oxidoreductases
  • Electron Transport Complex I
  • Cysteine

Associated data

  • PDB/1F37