The interaction of benzimidazole compounds with DNA: intercalation and groove binding modes

Nucleic Acids Symp Ser. 1999:(42):53-4. doi: 10.1093/nass/42.1.53.

Abstract

Benzimidazole compounds (Fig. 1) have been synthesized to study their DNA-binding properties. Results obtained with spectroscopy and viscosity measurements indicate that the binding mode varies from intercalation to groove-binding, depending on the number of benzimidazole rings (conformation and size of compounds).

MeSH terms

  • Benzimidazoles / chemistry*
  • Binding Sites
  • Circular Dichroism
  • DNA / chemistry*
  • Intercalating Agents / chemistry*
  • Molecular Conformation
  • Molecular Structure
  • Nucleic Acid Conformation
  • Viscosity

Substances

  • Benzimidazoles
  • Intercalating Agents
  • DNA