Coiled-coil structure-mediated dimerization of template activating factor-I is critical for its chromatin remodeling activity

J Mol Biol. 1999 Jul 9;290(2):547-57. doi: 10.1006/jmbi.1999.2898.

Abstract

Template activating factor-I (TAF-I)alpha and TAF-Ibeta have been identified as the host factors that activate DNA replication of the adenovirus genome complexed with viral basic core proteins (Ad core). TAF-I causes a structural change of the Ad core, thereby stimulating not only replication but also transcription from the Ad core DNA in vitro. TAF-I also activates transcription from the reconstituted chromatin consisting of DNA fragments and purified histones through chromatin remodeling. Although the carboxyl-terminal region, which is highly rich in acidic amino acids, is essential for the TAF-I activity, it remains unclear how other parts are involved in its activity. The native TAF-I isolated from HeLa cells exists as either hetero- or homo-oligomer. Here, we have demonstrated by cross-linking assays that most of TAF-I exists as a dimer. Analyses using deletion mutant TAF-I proteins revealed that the amino-terminal region of TAF-I common to both alpha and beta is essential for dimerization. This region is predicted to form a coiled-coil structure. Indeed, mutations disrupting this putative structure abolished the dimerization capability and reduced the TAF-I activity in the Ad core DNA replication assay. Furthermore, we found that TAF-I mutants lacking the acidic tail act in a dominant-negative manner in this assay. These observations strongly suggest that the dimerization of TAF-I is important for its activity.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenoviridae / genetics
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Binding Sites
  • Chromatin / chemistry
  • Chromatin / genetics
  • Chromatin / metabolism*
  • Chromosomal Proteins, Non-Histone*
  • Cross-Linking Reagents
  • DNA Replication
  • DNA-Binding Proteins
  • Deoxyribonucleases, Type II Site-Specific / metabolism
  • Dimerization
  • Genes, Dominant / genetics
  • Genome, Viral
  • HeLa Cells
  • Histone Chaperones
  • Humans
  • Molecular Sequence Data
  • Molecular Weight
  • Nuclear Proteins / chemistry*
  • Nuclear Proteins / genetics
  • Nuclear Proteins / metabolism*
  • Protein Denaturation
  • Protein Structure, Secondary
  • Sequence Deletion
  • Transcription Factors*
  • Viral Core Proteins / metabolism

Substances

  • Chromatin
  • Chromosomal Proteins, Non-Histone
  • Cross-Linking Reagents
  • DNA-Binding Proteins
  • Histone Chaperones
  • Nuclear Proteins
  • SET protein, human
  • Transcription Factors
  • Viral Core Proteins
  • CAGCTG-specific type II deoxyribonucleases
  • Deoxyribonucleases, Type II Site-Specific